Respiration and Energy Transfer
Introduction
- Respiration is a catabolic process where complex organic substrates are oxidized to simpler components, releasing biological energy in the form of ATP.
- It is essential for maintaining life by fulfilling the continuous need for energy.
- Key Processes: Cellular respiration occurs in two forms: aerobic (requires oxygen) and anaerobic (does not require oxygen).
13.1 Formation of ATP
- ATP Formation (Phosphorylation): The process of adding a phosphate group to ADP to form ATP. It occurs in three ways:
- Photophosphorylation: Occurs during photosynthesis (not detailed here).
- Substrate-Level Phosphorylation:
- Direct transfer of a phosphate group from a substrate to ADP.
- Occurs in the cytoplasm (glycolysis) and mitochondrial matrix (Krebs cycle).
- Oxidative Phosphorylation:
- Phosphorylation of ADP using energy from the oxidation of NADH+H⁺ and FADH₂.
- Occurs on the inner mitochondrial membrane via the electron transport chain.
- ATP Hydrolysis: When ATP is hydrolyzed, it releases energy for metabolic processes.
13.2 Anaerobic Respiration
- Definition: Cellular respiration without atmospheric oxygen, also called fermentation.
- Steps:
- Glycolysis: Breakdown of glucose into pyruvate.
- Fermentation: Incomplete conversion of pyruvate into lactic acid (muscles) or ethanol + CO₂ (yeast).
- Energy Yield: Only 2 ATP per glucose (from glycolysis).
Glycolysis
- Overview: A common step in both aerobic and anaerobic respiration, occurring in the cytoplasm.
- Process: Breaks down one glucose (6C) into two pyruvic acid (3C) molecules.
- Phases:
- Preparatory Phase (Steps 1-5):
- Glucose is phosphorylated twice, consuming 2 ATP.
- Forms fructose-1,6-bisphosphate, which splits into two 3-carbon molecules: glyceraldehyde-3-phosphate (G3P) and dihydroxyacetone phosphate (DHAP).
- DHAP is isomerized to G3P, yielding two G3P molecules.
- Pay-Off Phase (Steps 6-10):
- Each G3P is oxidized and phosphorylated, producing 2 NADH+H⁺ and 2 molecules of 1,3-bisphosphoglycerate.
- 1,3-bisphosphoglycerate is converted to pyruvate, generating 4 ATP via substrate-level phosphorylation.
- Preparatory Phase (Steps 1-5):
- Overall Reaction: Glucose + 2 ATP + 2 Pi + 4 ADP + 2 NAD⁺ → 2 Pyruvate + 2 ADP + 4 ATP + 2 NADH + 2 H⁺ + 2 H₂O
- Net Gain: 2 ATP, 2 NADH+H⁺ per glucose.
- Regulation: Controlled by enzymes (hexokinase, phosphofructokinase-1, pyruvate kinase), ATP levels, NADH regeneration, and hormones (glucagon, epinephrine, insulin).
Fermentation
- In Muscles:
- Pyruvate is reduced to lactic acid by NADH+H⁺, regenerating NAD⁺.
- Occurs during vigorous exercise, leading to lactic acid accumulation and muscle fatigue.
- During rest, lactic acid is converted back to pyruvate for aerobic respiration.
- In Yeast:
- Pyruvate is decarboxylated to acetaldehyde, then reduced to ethanol by NADH+H⁺, releasing CO₂.
- Called alcoholic fermentation.
- Ethanol accumulation can be toxic, halting yeast growth.
13.3 Aerobic Respiration
- Definition: Complete oxidation of glucose using molecular oxygen, yielding up to 38 ATP.
- Steps:
- Glycolysis (cytoplasm).
- Pyruvate oxidation (mitochondrial matrix).
- Krebs cycle (mitochondrial matrix).
- Electron transport chain and terminal oxidation (inner mitochondrial membrane).
Pyruvate to Acetyl CoA (Connecting Link Reaction)
- Location: Mitochondria (eukaryotes), cytoplasm (prokaryotes).
- Process: Oxidative decarboxylation of pyruvate (3C) to Acetyl CoA (2C), catalyzed by the pyruvate dehydrogenase complex (PDH).
- Coenzyme: Requires thiamin (vitamin B₁). Deficiency leads to pyruvic and lactic acidosis.
- Reaction: Pyruvate + NAD⁺ + CoA → Acetyl CoA + NADH + H⁺ + CO₂
- Significance: Links glycolysis to the Krebs cycle.
Krebs Cycle (TCA/Citric Acid Cycle)
- Location: Mitochondrial matrix.
- Overview: Oxidizes Acetyl CoA to CO₂, producing energy carriers (NADH, FADH₂) and GTP.
- Steps:
- Acetyl CoA (2C) combines with oxaloacetate (4C) to form citric acid (6C).
- Citric acid is oxidized step-wise, releasing 2 CO₂ and regenerating oxaloacetate.
- Four oxidation steps produce 3 NADH+H⁺ and 1 FADH₂ per Acetyl CoA.
- One GTP (equivalent to ATP) is produced via substrate-level phosphorylation (Succinyl CoA → Succinate).
- Per Glucose (two Acetyl CoA molecules):
- 6 NADH+H⁺, 2 FADH₂, 2 GTP, 4 CO₂.
- Significance:
- Common pathway for carbohydrates, fats, and proteins (via Acetyl CoA).
- Intermediates (e.g., α-ketoglutarate, oxaloacetate) are used for synthesizing amino acids and fatty acids.
- Amphibolic Pathway: Combines catabolism (energy release) and anabolism (biosynthesis).
Electron Transport Chain (ETC) and Oxidative Phosphorylation
- Location: Inner mitochondrial membrane.
- Components: Four complexes (I-IV), ubiquinone (CoQ), cytochrome c, and complex V (F0-F1 ATP synthase).
- Process:
- Complex I (NADH dehydrogenase): Oxidizes NADH+H⁺, transferring electrons to ubiquinone (CoQ), forming ubiquinol.
- Complex II (Succinate dehydrogenase): Oxidizes FADH₂, also feeding electrons to CoQ.
- Complex III (Cytochrome bc₁): Transfers electrons from ubiquinol to cytochrome c.
- Complex IV (Cytochrome c oxidase): Transfers electrons to O₂, forming water (terminal oxidation).
- Proton Gradient: Electron transfer pumps protons (H⁺) into the intermembrane space, creating a gradient.
- Chemiosmosis: Protons flow back into the matrix via F0-F1 ATP synthase, driving ATP synthesis (oxidative phosphorylation).
- ATP Yield:
- 1 NADH+H⁺ → 3 ATP.
- 1 FADH₂ → 2 ATP.
- Total from ETC: ~34 ATP per glucose.
- Significance:
- Produces the majority of ATP (34/38).
- Regenerates NAD⁺ and FAD⁺ for glycolysis and Krebs cycle.
- Produces water as a byproduct.
- Step-wise energy release prevents cellular damage.
ATP Balance Sheet (Aerobic Respiration)
Step | Substrate-Level Phosphorylation | Oxidative Phosphorylation (NADH+FADH₂) | Total ATP |
---|---|---|---|
Glycolysis | 4 ATP (net 2 ATP) | 2 NADH × 3 = 6 ATP | 8 ATP |
Pyruvate → Acetyl CoA | 0 | 2 NADH × 3 = 6 ATP | 6 ATP |
Krebs Cycle | 2 GTP (2 ATP) | 6 NADH × 3 + 2 FADH₂ × 2 = 18 + 4 = 22 ATP | 24 ATP |
Total | 6 ATP | 34 ATP | 38 ATP |
13.4 Utility of Step-Wise Oxidation
- Advantages:
- Efficient Energy Capture: Gradual release of energy maximizes ATP synthesis.
- Regulation: Enzyme activities can be controlled to adjust energy output based on cellular needs.
- Intermediates for Biosynthesis: Provides molecules (e.g., pyruvate, α-ketoglutarate) for synthesizing amino acids, fatty acids, etc.
Respiratory Quotient (RQ)
- Definition: Ratio of CO₂ released to O₂ consumed during respiration.
- Values:
- Carbohydrates: RQ = 1 (equal CO₂ and O₂ volumes).
- Fats: RQ ≈ 0.7 (more O₂ consumed, less CO₂ produced).
- Proteins: RQ ≈ 0.9.
- Anaerobic Respiration: RQ = ∞ (CO₂ produced without O₂ consumption).
Significance of Respiration
- Provides energy for biomolecule synthesis, cell division, growth, and locomotion.
- Supplies intermediates for synthesizing complex compounds (e.g., amino acids, fatty acids).
- Maintains atmospheric CO₂ and O₂ balance with photosynthesis.
- Anaerobic Respiration:
- Used in industries (e.g., bakeries, distilleries) for producing alcohol, organic acids, antibiotics, etc.
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